Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | PHEP_RS15080 | Not Available | Negative | 3631659 - 3633104 | 53904.2 |
| carboxypeptidase-like regulatory domain-containing protein | PHEP_RS15085 | Not Available | Negative | 3633199 - 3635667 | 91214.0 |
| glutamate racemase | PHEP_RS15090 | Not Available | Positive | 3635802 - 3637328 | 57286.2 |
| m14 family zinc carboxypeptidase | PHEP_RS15095 | Not Available | Negative | 3637330 - 3638802 | 55807.1 |
| gntp family permease | PHEP_RS15100 | Not Available | Positive | 3638901 - 3640235 | 46887.5 |
| glycerate kinase | PHEP_RS15105 | Not Available | Positive | 3640235 - 3641368 | 39490.7 |
| Trna-gly | Not Available | Not Available | Positive | 3641397 - 3641472 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3641507 - 3641594 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3641660 - 3641735 | Not Available |
| regulatory protein recx | PHEP_RS15125 | Not Available | Negative | 3641867 - 3642358 | 19253.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
