Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | PHEP_RS15030 | Not Available | Positive | 3622243 - 3622950 | 26820.5 |
| duf502 domain-containing protein | PHEP_RS15035 | Not Available | Negative | 3622979 - 3623572 | 21794.1 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | PHEP_RS15040 | Not Available | Negative | 3623625 - 3626078 | 91070.4 |
| gnat family n-acetyltransferase | PHEP_RS15045 | Not Available | Positive | 3626262 - 3627125 | 32801.1 |
| rrf2 family transcriptional regulator | PHEP_RS15050 | Not Available | Negative | 3627102 - 3627569 | 17059.7 |
| suf system fe-s cluster assembly protein | PHEP_RS15055 | Not Available | Negative | 3627585 - 3627899 | 11773.3 |
| sufe family protein | PHEP_RS15060 | Not Available | Negative | 3627903 - 3628346 | 16882.5 |
| cysteine desulfurase | PHEP_RS15065 | Not Available | Negative | 3628346 - 3629560 | 44440.7 |
| fe-s cluster assembly protein sufd | PHEP_RS15070 | Not Available | Negative | 3629560 - 3630870 | 48700.6 |
| fe-s cluster assembly atpase sufc | PHEP_RS15075 | Not Available | Negative | 3630883 - 3631644 | 28186.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
