Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding glutamate synthase family protein | PHEP_RS14980 | Not Available | Negative | 3611801 - 3613471 | 61037.5 |
| l-threonylcarbamoyladenylate synthase | PHEP_RS14985 | Not Available | Positive | 3613550 - 3614170 | 22930.5 |
| na+/h+ antiporter nhaa | PHEP_RS14990 | Not Available | Positive | 3614201 - 3615388 | 42530.2 |
| tryptophan synthase subunit alpha | PHEP_RS14995 | Not Available | Negative | 3615375 - 3616145 | 28199.9 |
| tryptophan synthase subunit beta | PHEP_RS15000 | Not Available | Negative | 3616165 - 3617346 | 43134.9 |
| phosphoribosylanthranilate isomerase | PHEP_RS15005 | Not Available | Negative | 3617343 - 3617975 | 23345.4 |
| anthranilate phosphoribosyltransferase | PHEP_RS15010 | Not Available | Negative | 3618002 - 3618991 | 36014.3 |
| sdr family oxidoreductase | PHEP_RS15015 | Not Available | Negative | 3619208 - 3620026 | 29587.5 |
| recombination mediator recr | PHEP_RS15020 | Not Available | Negative | 3620029 - 3620646 | 22871.8 |
| sodium:solute symporter | PHEP_RS15025 | Not Available | Positive | 3620746 - 3622224 | 54768.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
