Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had hydrolase-like protein | PHEP_RS14930 | Not Available | Negative | 3603141 - 3603749 | 23842.1 |
| hypothetical protein | PHEP_RS14935 | Not Available | Negative | 3603752 - 3604078 | 11874.5 |
| abc transporter atp-binding protein | PHEP_RS14940 | Not Available | Negative | 3604078 - 3604731 | 23821.9 |
| hypothetical protein | PHEP_RS14945 | Not Available | Positive | 3604844 - 3605473 | 23365.0 |
| winged helix-turn-helix domain-containing protein | PHEP_RS14950 | Not Available | Positive | 3605473 - 3605769 | 11105.7 |
| hypothetical protein | PHEP_RS14955 | Not Available | Positive | 3605819 - 3606121 | 11303.4 |
| duf4173 domain-containing protein | PHEP_RS14960 | Not Available | Positive | 3606141 - 3607757 | 62070.0 |
| ferritin-like domain-containing protein | PHEP_RS14965 | Not Available | Positive | 3607775 - 3608530 | 29903.3 |
| adp-forming succinate--coa ligase subunit beta | PHEP_RS14970 | Not Available | Positive | 3608571 - 3609761 | 42772.5 |
| asparagine--trna ligase | PHEP_RS14975 | Not Available | Positive | 3610277 - 3611725 | 55472.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
