Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3341 domain-containing protein | PHEP_RS01455 | Not Available | Positive | 341822 - 342358 | 20138.4 |
| cytochrome c | PHEP_RS01460 | Not Available | Positive | 342351 - 342956 | 22017.0 |
| hypothetical protein | PHEP_RS01465 | Not Available | Positive | 342972 - 344186 | 46121.6 |
| cytochrome c oxidase subunit ii | PHEP_RS01470 | Not Available | Positive | 344255 - 345481 | 45799.0 |
| cytochrome c oxidase subunit i | PHEP_RS01475 | Not Available | Positive | 345502 - 347391 | 70845.2 |
| cox15/ctaa family protein | PHEP_RS01480 | Not Available | Positive | 347478 - 348542 | 39728.7 |
| heme o synthase | PHEP_RS01485 | Not Available | Positive | 348554 - 349456 | 33580.1 |
| cytochrome c oxidase subunit 3 | PHEP_RS01490 | Not Available | Positive | 349463 - 350053 | 22080.5 |
| cytochrome c oxidase subunit 3 | PHEP_RS01495 | Not Available | Positive | 350084 - 350791 | 26761.9 |
| cytochrome c oxidase subunit iv family protein | PHEP_RS01500 | Not Available | Positive | 350812 - 351171 | 13698.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
