Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PHEP_RS14880 | Not Available | Negative | 3590472 - 3593036 | 93861.2 |
| dihydrolipoyl dehydrogenase | PHEP_RS14885 | Not Available | Positive | 3593364 - 3594752 | 48735.0 |
| mbl fold metallo-hydrolase | PHEP_RS14890 | Not Available | Positive | 3594841 - 3595683 | 32085.4 |
| yegp family protein | PHEP_RS14895 | Not Available | Positive | 3595812 - 3596141 | 11925.6 |
| sigma-70 family rna polymerase sigma factor | PHEP_RS14900 | Not Available | Positive | 3596495 - 3597355 | 32680.1 |
| glyceraldehyde-3-phosphate dehydrogenase | PHEP_RS14905 | Not Available | Positive | 3597464 - 3598912 | 53496.2 |
| potassium channel beta subunit family protein | PHEP_RS14910 | Not Available | Negative | 3598980 - 3599963 | 36922.8 |
| m20/m25/m40 family metallo-hydrolase | PHEP_RS14915 | Not Available | Positive | 3600109 - 3601047 | 35420.9 |
| hypothetical protein | PHEP_RS14920 | Not Available | Negative | 3601050 - 3601316 | 9825.75 |
| s41 family peptidase | PHEP_RS21710 | Not Available | Negative | 3601473 - 3603098 | 59473.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
