Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS14830 | Not Available | Negative | 3576392 - 3578158 | 67411.0 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS14835 | Not Available | Negative | 3578190 - 3581423 | 120639.0 |
| duf5689 domain-containing protein | PHEP_RS21705 | Not Available | Negative | 3581460 - 3582662 | 43487.6 |
| hypothetical protein | PHEP_RS14845 | Not Available | Negative | 3582698 - 3584848 | 80237.7 |
| rok family transcriptional regulator | PHEP_RS14850 | Not Available | Positive | 3585073 - 3586290 | 44742.9 |
| rok family transcriptional regulator | PHEP_RS14855 | Not Available | Positive | 3586402 - 3587628 | 44847.3 |
| duf6691 family protein | PHEP_RS14860 | Not Available | Negative | 3587669 - 3588085 | 15347.5 |
| yeee/yede family protein | PHEP_RS14865 | Not Available | Negative | 3588087 - 3588650 | 20060.0 |
| rna recognition motif domain-containing protein | PHEP_RS14870 | Not Available | Negative | 3588659 - 3588961 | 11330.0 |
| hypothetical protein | PHEP_RS14875 | Not Available | Negative | 3589325 - 3590461 | 41781.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
