Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | PHEP_RS14775 | Not Available | Negative | 3557677 - 3558630 | 35471.3 |
| type ix secretion system membrane protein porp/sprf | PHEP_RS14780 | Not Available | Negative | 3558732 - 3559631 | 32790.0 |
| mbg domain-containing protein | PHEP_RS21700 | Not Available | Negative | 3559700 - 3566590 | 238498.0 |
| helix-turn-helix domain-containing protein | PHEP_RS14790 | Not Available | Negative | 3566756 - 3567952 | 46078.7 |
| dinb family protein | PHEP_RS14795 | Not Available | Negative | 3568134 - 3568655 | 19692.2 |
| s46 family peptidase | PHEP_RS14800 | Not Available | Positive | 3568772 - 3570940 | 81361.8 |
| fg-gap-like repeat-containing protein | PHEP_RS14805 | Not Available | Negative | 3571071 - 3572933 | 68637.0 |
| sugar mfs transporter | PHEP_RS14815 | Not Available | Negative | 3573059 - 3574297 | 44376.1 |
| age family epimerase/isomerase | PHEP_RS14820 | Not Available | Negative | 3574301 - 3575503 | 46830.6 |
| endonuclease/exonuclease/phosphatase family protein | PHEP_RS14825 | Not Available | Negative | 3575530 - 3576354 | 30091.9 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
