Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | PHEP_RS14725 | Not Available | Positive | 3542889 - 3543362 | 17428.9 |
| class 1 fructose-bisphosphatase | PHEP_RS14730 | Not Available | Negative | 3543384 - 3544469 | 39156.9 |
| metallophosphoesterase family protein | PHEP_RS14735 | Not Available | Negative | 3544491 - 3544982 | 18515.5 |
| trna1(val) (adenine(37)-n6)-methyltransferase | PHEP_RS14740 | Not Available | Negative | 3544992 - 3545696 | 26258.7 |
| phosphoribosylformylglycinamidine synthase | PHEP_RS14745 | Not Available | Positive | 3546082 - 3549813 | 136703.0 |
| head gin domain-containing protein | PHEP_RS14750 | Not Available | Positive | 3549865 - 3550596 | 25090.0 |
| duf2339 domain-containing protein | PHEP_RS14755 | Not Available | Positive | 3550655 - 3553156 | 92927.2 |
| hypothetical protein | PHEP_RS14760 | Not Available | Positive | 3553143 - 3554045 | 34565.9 |
| glutamine synthetase iii | PHEP_RS14765 | Not Available | Positive | 3554195 - 3556381 | 81394.4 |
| air synthase related protein | PHEP_RS14770 | Not Available | Positive | 3556495 - 3557676 | 43045.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
