Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS14675 | Not Available | Negative | 3529267 - 3529572 | 10898.2 |
| tetratricopeptide repeat-containing sensor histidine kinase | PHEP_RS14680 | Not Available | Positive | 3529732 - 3531669 | 73743.9 |
| response regulator | PHEP_RS14685 | Not Available | Positive | 3531673 - 3532293 | 22830.2 |
| outer membrane beta-barrel family protein | PHEP_RS14690 | Not Available | Negative | 3532322 - 3535015 | 100237.0 |
| hypothetical protein | PHEP_RS14695 | Not Available | Negative | 3535339 - 3536640 | 49023.4 |
| tetratricopeptide repeat protein | PHEP_RS14700 | Not Available | Negative | 3536655 - 3538763 | 74568.5 |
| hypothetical protein | PHEP_RS14705 | Not Available | Negative | 3538829 - 3539455 | 22522.3 |
| ipt/tig domain-containing protein | PHEP_RS14710 | Not Available | Negative | 3539647 - 3540981 | 46534.1 |
| serine hydrolase domain-containing protein | PHEP_RS14715 | Not Available | Positive | 3541175 - 3542563 | 51819.7 |
| Trna-his | Not Available | Not Available | Positive | 3542635 - 3542710 | Not Available |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
