Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | PHEP_RS14625 | Not Available | Negative | 3515304 - 3516191 | 33045.5 |
| tolc family protein | PHEP_RS14630 | Not Available | Negative | 3516250 - 3517683 | 53004.9 |
| efflux rnd transporter permease subunit | PHEP_RS14635 | Not Available | Negative | 3517676 - 3520843 | 115670.0 |
| efflux rnd transporter periplasmic adaptor subunit | PHEP_RS14640 | Not Available | Negative | 3520868 - 3521950 | 40562.9 |
| hypothetical protein | PHEP_RS14645 | Not Available | Negative | 3522036 - 3522443 | 15507.7 |
| alkaline phosphatase family protein | PHEP_RS14650 | Not Available | Negative | 3522551 - 3524980 | 89580.6 |
| metallophosphoesterase family protein | PHEP_RS14655 | Not Available | Negative | 3524991 - 3525836 | 31544.5 |
| dicarboxylate/amino acid:cation symporter | PHEP_RS14660 | Not Available | Positive | 3526083 - 3527303 | 43222.0 |
| c-type cytochrome | PHEP_RS14665 | Not Available | Positive | 3527459 - 3528442 | 35764.6 |
| type i methionyl aminopeptidase | PHEP_RS14670 | Not Available | Positive | 3528472 - 3529236 | 27777.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
