Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | PHEP_RS14575 | Not Available | Negative | 3504531 - 3505637 | 40965.6 |
| sulfatase | PHEP_RS14580 | Not Available | Negative | 3505659 - 3507101 | 52844.5 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS14585 | Not Available | Negative | 3507104 - 3507874 | 27227.6 |
| duf4861 family protein | PHEP_RS14590 | Not Available | Negative | 3507892 - 3509028 | 41907.2 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | PHEP_RS14595 | Not Available | Negative | 3509047 - 3509889 | 31313.1 |
| laci family dna-binding transcriptional regulator | PHEP_RS14600 | Not Available | Negative | 3509957 - 3511000 | 38246.0 |
| (fe-s)-binding protein | PHEP_RS14605 | Not Available | Positive | 3511149 - 3511883 | 26927.8 |
| lactate utilization protein b | PHEP_RS14610 | Not Available | Positive | 3511895 - 3513271 | 51746.2 |
| lutc/ykgg family protein | PHEP_RS14615 | Not Available | Positive | 3513268 - 3513849 | 20941.9 |
| mfs transporter | PHEP_RS14620 | Not Available | Negative | 3513853 - 3515094 | 44429.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
