Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1c family serine protease | PHEP_RS14525 | Not Available | Negative | 3494760 - 3495851 | 40018.9 |
| rna polymerase sigma factor | PHEP_RS14530 | Not Available | Negative | 3495858 - 3496424 | 21851.0 |
| hypothetical protein | PHEP_RS14535 | Not Available | Positive | 3496970 - 3497182 | 7330.51 |
| adenylosuccinate lyase | PHEP_RS14540 | Not Available | Positive | 3497278 - 3498624 | 50700.4 |
| nifu family protein | PHEP_RS14545 | Not Available | Positive | 3498725 - 3499276 | 20201.9 |
| inositol monophosphatase family protein | PHEP_RS14550 | Not Available | Negative | 3499336 - 3500127 | 29590.7 |
| prolipoprotein diacylglyceryl transferase | PHEP_RS14555 | Not Available | Negative | 3500140 - 3501294 | 43241.5 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | PHEP_RS14560 | Not Available | Negative | 3501326 - 3502645 | 49310.2 |
| ubix family flavin prenyltransferase | PHEP_RS14565 | Not Available | Negative | 3502712 - 3503278 | 20936.4 |
| arac family transcriptional regulator | PHEP_RS14570 | Not Available | Positive | 3503659 - 3504528 | 33458.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
