Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease muts2 | PHEP_RS14475 | Not Available | Negative | 3482390 - 3484768 | 89648.6 |
| duf4296 domain-containing protein | PHEP_RS14480 | Not Available | Negative | 3484771 - 3485298 | 19839.3 |
| yggs family pyridoxal phosphate-dependent enzyme | PHEP_RS14485 | Not Available | Positive | 3485369 - 3486058 | 25842.3 |
| gnat family n-acetyltransferase | PHEP_RS14490 | Not Available | Positive | 3486055 - 3486531 | 18016.4 |
| duf3298 and duf4163 domain-containing protein | PHEP_RS14495 | Not Available | Positive | 3486543 - 3487346 | 30440.8 |
| aspartate kinase | PHEP_RS14500 | Not Available | Positive | 3487350 - 3488624 | 48363.5 |
| hypothetical protein | PHEP_RS14505 | Not Available | Positive | 3488633 - 3489817 | 44143.5 |
| duf2723 domain-containing protein | PHEP_RS14510 | Not Available | Positive | 3489968 - 3492973 | 112428.0 |
| peroxiredoxin | PHEP_RS14515 | Not Available | Negative | 3493026 - 3493661 | 23612.0 |
| duf72 domain-containing protein | PHEP_RS14520 | Not Available | Negative | 3493736 - 3494680 | 36020.4 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
