Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS01405 | Not Available | Positive | 329109 - 329612 | 17299.1 |
| peptide chain release factor 2 | PHEP_RS01410 | Not Available | Positive | 329716 - 330790 | 41277.7 |
| alpha/beta hydrolase | PHEP_RS01415 | Not Available | Positive | 330792 - 331703 | 32920.6 |
| transglutaminase-like domain-containing protein | PHEP_RS01420 | Not Available | Negative | 331698 - 332567 | 33684.1 |
| o-methyltransferase | PHEP_RS01425 | Not Available | Positive | 332585 - 333385 | 30358.8 |
| hypothetical protein | PHEP_RS01430 | Not Available | Negative | 333409 - 334539 | 42720.6 |
| deoxyhypusine synthase family protein | PHEP_RS01435 | Not Available | Positive | 334652 - 335632 | 36924.2 |
| c-type cytochrome | PHEP_RS01440 | Not Available | Positive | 335886 - 337184 | 48051.1 |
| tat-variant-translocated molybdopterin oxidoreductase | PHEP_RS01445 | Not Available | Positive | 337231 - 340311 | 113018.0 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | PHEP_RS01450 | Not Available | Positive | 340347 - 341819 | 55692.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
