Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdig domain-containing metalloprotein | PHEP_RS14375 | Not Available | Negative | 3459277 - 3461289 | 76818.8 |
| acetyl-coa c-acyltransferase | PHEP_RS14380 | Not Available | Positive | 3461737 - 3462924 | 40892.9 |
| hypothetical protein | PHEP_RS14385 | Not Available | Positive | 3462917 - 3463843 | 34811.9 |
| peptide mfs transporter | PHEP_RS14390 | Not Available | Positive | 3463972 - 3465726 | 64856.2 |
| peptide mfs transporter | PHEP_RS14395 | Not Available | Positive | 3465739 - 3467232 | 55595.1 |
| polyprenol monophosphomannose synthase | PHEP_RS14400 | Not Available | Positive | 3467328 - 3468059 | 27941.1 |
| ydei/ompd-associated family protein | PHEP_RS14405 | Not Available | Negative | 3468061 - 3468576 | 19870.2 |
| tigr02757 family protein | PHEP_RS14410 | Not Available | Negative | 3468610 - 3469446 | 32106.5 |
| cystathionine gamma-synthase | PHEP_RS14415 | Not Available | Negative | 3469512 - 3470651 | 41903.4 |
| hypothetical protein | PHEP_RS14420 | Not Available | Negative | 3470635 - 3471342 | 26998.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
