Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS14330 | Not Available | Negative | 3448821 - 3450695 | 68784.5 |
| tonb-dependent receptor | PHEP_RS14335 | Not Available | Negative | 3450711 - 3453944 | 118690.0 |
| fecr family protein | PHEP_RS14340 | Not Available | Negative | 3454212 - 3455366 | 42591.2 |
| rna polymerase sigma-70 factor | PHEP_RS14345 | Not Available | Negative | 3455442 - 3456008 | 22313.2 |
| ankyrin repeat domain-containing protein | PHEP_RS14350 | Not Available | Positive | 3456334 - 3457083 | 27803.3 |
| pa2169 family four-helix-bundle protein | PHEP_RS14355 | Not Available | Negative | 3457359 - 3457811 | 16389.3 |
| hypothetical protein | PHEP_RS22420 | Not Available | Positive | 3457876 - 3458010 | 5015.86 |
| hypothetical protein | PHEP_RS14360 | Not Available | Negative | 3458005 - 3458304 | 11537.0 |
| hsp20/alpha crystallin family protein | PHEP_RS14365 | Not Available | Negative | 3458365 - 3458802 | 16612.5 |
| Trna-ser | Not Available | Not Available | Positive | 3459119 - 3459208 | Not Available |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
