Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88/105 protein | PHEP_RS14280 | Not Available | Negative | 3430068 - 3431246 | 44398.2 |
| gfo/idh/moca family protein | PHEP_RS14285 | Not Available | Negative | 3431274 - 3432680 | 51877.4 |
| hypothetical protein | PHEP_RS14290 | Not Available | Negative | 3432705 - 3434636 | 72706.6 |
| npcbm/new2 domain-containing protein | PHEP_RS14295 | Not Available | Negative | 3434667 - 3436700 | 75293.7 |
| hypothetical protein | PHEP_RS14300 | Not Available | Negative | 3436702 - 3438894 | 81428.7 |
| npcbm/new2 domain-containing protein | PHEP_RS14305 | Not Available | Negative | 3438901 - 3440931 | 75269.3 |
| glycoside hydrolase family 28 protein | PHEP_RS14310 | Not Available | Negative | 3440933 - 3442525 | 58144.8 |
| hypothetical protein | PHEP_RS14315 | Not Available | Negative | 3442563 - 3444731 | 81477.2 |
| sulfatase family protein | PHEP_RS14320 | Not Available | Negative | 3444745 - 3446316 | 57730.1 |
| gh92 family glycosyl hydrolase | PHEP_RS14325 | Not Available | Negative | 3446330 - 3448717 | 89385.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
