Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maue/doxx family redox-associated membrane protein | PHEP_RS14180 | Not Available | Positive | 3414193 - 3414780 | 22626.3 |
| hypothetical protein | PHEP_RS14185 | Not Available | Positive | 3414864 - 3415124 | 9090.79 |
| hypothetical protein | PHEP_RS14190 | Not Available | Positive | 3415221 - 3416267 | 39719.4 |
| hypothetical protein | PHEP_RS14195 | Not Available | Positive | 3416301 - 3416555 | 10145.6 |
| hypothetical protein | PHEP_RS14200 | Not Available | Negative | 3416529 - 3416762 | 8815.83 |
| duf6266 family protein | PHEP_RS14205 | Not Available | Positive | 3417120 - 3417761 | 23125.6 |
| hypothetical protein | PHEP_RS14210 | Not Available | Positive | 3417811 - 3417993 | 6685.59 |
| 3-keto-disaccharide hydrolase | PHEP_RS14215 | Not Available | Negative | 3418106 - 3419086 | 35557.5 |
| fg-gap-like repeat-containing protein | PHEP_RS14220 | Not Available | Positive | 3419414 - 3421279 | 67329.8 |
| hit family protein | PHEP_RS14225 | Not Available | Positive | 3421490 - 3421855 | 13646.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
