Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS14135 | Not Available | Positive | 3405840 - 3407279 | 53525.0 |
| redoxin domain-containing protein | PHEP_RS14140 | Not Available | Positive | 3407345 - 3408637 | 49589.1 |
| alkaline phosphatase family protein | PHEP_RS22410 | Not Available | Positive | 3408627 - 3409280 | 24304.6 |
| alkaline phosphatase family protein | PHEP_RS22415 | Not Available | Positive | 3409261 - 3410001 | 25800.2 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | PHEP_RS14150 | Not Available | Positive | 3410039 - 3410221 | 6799.26 |
| hypothetical protein | PHEP_RS14155 | Not Available | Positive | 3410373 - 3410675 | 11126.5 |
| hypothetical protein | PHEP_RS14160 | Not Available | Positive | 3410676 - 3411098 | 16336.0 |
| orf6n domain-containing protein | PHEP_RS14165 | Not Available | Positive | 3411161 - 3411622 | 17694.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PHEP_RS14170 | Not Available | Positive | 3412132 - 3413415 | 47873.5 |
| tetr/acrr family transcriptional regulator | PHEP_RS14175 | Not Available | Positive | 3413429 - 3414163 | 27268.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
