Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator transcription factor | PHEP_RS13985 | Not Available | Negative | 3351335 - 3355405 | 154590.0 |
| sulfatase | PHEP_RS13990 | Not Available | Negative | 3355536 - 3356930 | 51940.6 |
| sulfatase | PHEP_RS13995 | Not Available | Negative | 3356938 - 3358440 | 56772.6 |
| sulfatase/phosphatase domain-containing protein | PHEP_RS14000 | Not Available | Negative | 3358452 - 3360080 | 62762.3 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS14005 | Not Available | Negative | 3360092 - 3361741 | 62128.1 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS14010 | Not Available | Negative | 3361760 - 3364921 | 114634.0 |
| glycoside hydrolase family 88 protein | PHEP_RS14015 | Not Available | Positive | 3365185 - 3366393 | 45623.1 |
| sulfatase-like hydrolase/transferase | PHEP_RS14020 | Not Available | Positive | 3366547 - 3367869 | 49834.7 |
| hybrid sensor histidine kinase/response regulator transcription factor | PHEP_RS14025 | Not Available | Negative | 3367870 - 3371931 | 154913.0 |
| duf4962 domain-containing protein | PHEP_RS14030 | Not Available | Negative | 3371975 - 3374656 | 100841.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
