Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | PHEP_RS13935 | Not Available | Negative | 3333131 - 3334066 | 34731.8 |
| sodium:solute symporter | PHEP_RS13940 | Not Available | Negative | 3334114 - 3335643 | 55822.1 |
| malectin domain-containing carbohydrate-binding protein | PHEP_RS13945 | Not Available | Negative | 3335830 - 3339345 | 131243.0 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | PHEP_RS13950 | Not Available | Negative | 3339342 - 3342164 | 103546.0 |
| glycoside hydrolase family 28 protein | PHEP_RS13955 | Not Available | Negative | 3342182 - 3343810 | 59798.7 |
| mgh1-like glycoside hydrolase domain-containing protein | PHEP_RS13960 | Not Available | Negative | 3343807 - 3345354 | 59259.3 |
| hypothetical protein | PHEP_RS13965 | Not Available | Negative | 3345354 - 3348101 | 103336.0 |
| lrp/asnc family transcriptional regulator | PHEP_RS13970 | Not Available | Positive | 3348567 - 3349052 | 18667.7 |
| mfs transporter | PHEP_RS13975 | Not Available | Negative | 3349049 - 3350296 | 45424.4 |
| rok family protein | PHEP_RS13980 | Not Available | Negative | 3350312 - 3351232 | 32161.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
