Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | PHEP_RS01355 | Not Available | Positive | 316580 - 319888 | 123957.0 |
| spor domain-containing protein | PHEP_RS01360 | Not Available | Positive | 319953 - 320402 | 17047.6 |
| m20 metallopeptidase family protein | PHEP_RS01365 | Not Available | Positive | 320402 - 321586 | 43147.8 |
| hypothetical protein | PHEP_RS01370 | Not Available | Positive | 321601 - 322548 | 37096.8 |
| sgnh/gdsl hydrolase family protein | PHEP_RS01375 | Not Available | Positive | 322590 - 323252 | 24567.3 |
| dna primase | PHEP_RS01380 | Not Available | Positive | 323303 - 325285 | 73999.3 |
| yran family protein | PHEP_RS01385 | Not Available | Positive | 325286 - 325648 | 14148.6 |
| glutaminyl-peptide cyclotransferase | PHEP_RS01390 | Not Available | Positive | 325629 - 326723 | 40378.3 |
| duf4251 domain-containing protein | PHEP_RS01395 | Not Available | Negative | 326766 - 327296 | 19574.6 |
| glucose-6-phosphate isomerase | PHEP_RS01400 | Not Available | Negative | 327403 - 329049 | 61723.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
