Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | PHEP_RS13835 | Not Available | Positive | 3306365 - 3306793 | 16663.0 |
| polysaccharide lyase | PHEP_RS13840 | Not Available | Negative | 3306958 - 3308613 | 60816.4 |
| outer membrane beta-barrel protein | PHEP_RS13845 | Not Available | Negative | 3308834 - 3311644 | 104213.0 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS13850 | Not Available | Positive | 3311957 - 3312721 | 27651.9 |
| l-fucose/l-arabinose isomerase family protein | PHEP_RS13855 | Not Available | Positive | 3312724 - 3314130 | 51596.7 |
| transketolase | PHEP_RS13860 | Not Available | Positive | 3314109 - 3314933 | 30051.8 |
| transketolase family protein | PHEP_RS13865 | Not Available | Positive | 3314944 - 3315906 | 34155.1 |
| d-ribose abc transporter substrate-binding protein | PHEP_RS13870 | Not Available | Positive | 3315948 - 3316880 | 33515.1 |
| duf2291 domain-containing protein | PHEP_RS13875 | Not Available | Positive | 3316884 - 3317510 | 23499.4 |
| sugar abc transporter atp-binding protein | PHEP_RS13880 | Not Available | Positive | 3317518 - 3319023 | 54965.7 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
