Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS13685 | Not Available | Positive | 3267739 - 3267969 | 8688.08 |
| hypothetical protein | PHEP_RS13690 | Not Available | Negative | 3268028 - 3268228 | 7198.41 |
| srpbcc family protein | PHEP_RS13695 | Not Available | Negative | 3268390 - 3268824 | 16261.2 |
| duf1801 domain-containing protein | PHEP_RS13700 | Not Available | Negative | 3268875 - 3269234 | 13560.5 |
| duf4199 domain-containing protein | PHEP_RS13705 | Not Available | Negative | 3269231 - 3269719 | 18491.2 |
| crp/fnr family transcriptional regulator | PHEP_RS13710 | Not Available | Negative | 3269833 - 3270378 | 20967.3 |
| helix-turn-helix domain-containing protein | PHEP_RS13715 | Not Available | Negative | 3270418 - 3270615 | 7686.25 |
| dinb family protein | PHEP_RS13720 | Not Available | Negative | 3270766 - 3271275 | 19480.2 |
| duf6266 family protein | PHEP_RS13725 | Not Available | Positive | 3271585 - 3272073 | 17931.0 |
| amylo-alpha-1,6-glucosidase | PHEP_RS13730 | Not Available | Negative | 3272064 - 3274268 | 83983.8 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
