Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa transferase family protein | PHEP_RS13640 | Not Available | Negative | 3255420 - 3256583 | 42543.2 |
| caib/baif coa transferase family protein | PHEP_RS13645 | Not Available | Negative | 3256587 - 3257738 | 41599.3 |
| abc transporter substrate-binding protein | PHEP_RS13650 | Not Available | Negative | 3257735 - 3258895 | 43445.5 |
| beta-galactosidase galb | PHEP_RS13655 | Not Available | Negative | 3258935 - 3261352 | 90986.8 |
| glycosylase | PHEP_RS13660 | Not Available | Negative | 3261362 - 3262471 | 42703.6 |
| family 78 glycoside hydrolase catalytic domain | PHEP_RS13665 | Not Available | Negative | 3262480 - 3265230 | 101933.0 |
| iclr family transcriptional regulator | PHEP_RS13670 | Not Available | Positive | 3265446 - 3266225 | 28538.8 |
| hypothetical protein | PHEP_RS22255 | Not Available | Positive | 3266358 - 3266501 | 5484.73 |
| duf1810 domain-containing protein | PHEP_RS21935 | Not Available | Positive | 3266726 - 3267160 | 16601.2 |
| hypothetical protein | PHEP_RS21685 | Not Available | Positive | 3267415 - 3267726 | 11816.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
