Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:sodium symporter family protein | PHEP_RS13590 | Not Available | Negative | 3241160 - 3242467 | 47127.3 |
| aspartate/glutamate racemase family protein | PHEP_RS13595 | Not Available | Negative | 3242473 - 3243135 | 23025.3 |
| four-carbon acid sugar kinase family protein | PHEP_RS13600 | Not Available | Negative | 3243132 - 3244541 | 50355.5 |
| ribulose-bisphosphate carboxylase large subunit family protein | PHEP_RS13605 | Not Available | Negative | 3244545 - 3245795 | 44988.1 |
| glycoside hydrolase family 127 protein | PHEP_RS13610 | Not Available | Negative | 3245807 - 3247849 | 76461.7 |
| glycosyl hydrolase | PHEP_RS13615 | Not Available | Negative | 3247888 - 3251307 | 126016.0 |
| l-fucose:h+ symporter permease | PHEP_RS13620 | Not Available | Negative | 3251307 - 3252602 | 46461.8 |
| maoc/paaz c-terminal domain-containing protein | PHEP_RS13625 | Not Available | Negative | 3252655 - 3253095 | 16807.2 |
| gfo/idh/moca family protein | PHEP_RS13630 | Not Available | Negative | 3253109 - 3254188 | 40090.7 |
| extracellular solute-binding protein | PHEP_RS13635 | Not Available | Negative | 3254195 - 3255427 | 45967.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
