Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | PHEP_RS13490 | Not Available | Positive | 3213754 - 3214347 | 22903.6 |
| rna polymerase sigma-70 factor | PHEP_RS13495 | Not Available | Negative | 3214372 - 3214950 | 22916.8 |
| hybrid sensor histidine kinase/response regulator transcription factor | PHEP_RS13500 | Not Available | Negative | 3215202 - 3219269 | 154834.0 |
| galactose-1-epimerase | PHEP_RS13505 | Not Available | Negative | 3219410 - 3220582 | 42304.6 |
| nudix hydrolase | PHEP_RS13510 | Not Available | Positive | 3220701 - 3221411 | 27468.4 |
| ribulokinase | PHEP_RS13515 | Not Available | Positive | 3221500 - 3223173 | 60460.2 |
| l-ribulose-5-phosphate 4-epimerase | PHEP_RS13520 | Not Available | Positive | 3223186 - 3223884 | 25946.9 |
| l-arabinose isomerase | PHEP_RS13525 | Not Available | Positive | 3223906 - 3225396 | 55238.0 |
| sodium:solute symporter family transporter | PHEP_RS13530 | Not Available | Positive | 3225462 - 3227147 | 61159.3 |
| sensor histidine kinase | PHEP_RS13535 | Not Available | Negative | 3227232 - 3228299 | 40499.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
