Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | PHEP_RS13440 | Not Available | Negative | 3192607 - 3194118 | 55330.3 |
| duf1553 domain-containing protein | PHEP_RS13445 | Not Available | Negative | 3194123 - 3196858 | 103402.0 |
| phosphocholine-specific phospholipase c | PHEP_RS13450 | Not Available | Negative | 3196978 - 3199167 | 81553.1 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | PHEP_RS13455 | Not Available | Negative | 3199322 - 3202459 | 119226.0 |
| family 20 glycosylhydrolase | PHEP_RS13460 | Not Available | Negative | 3202484 - 3204823 | 87542.3 |
| duf6528 family protein | PHEP_RS21675 | Not Available | Negative | 3204888 - 3205988 | 39465.1 |
| duf6528 family protein | PHEP_RS13470 | Not Available | Negative | 3206001 - 3207056 | 38108.4 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS13475 | Not Available | Negative | 3207159 - 3208811 | 61942.6 |
| tonb-dependent receptor | PHEP_RS13480 | Not Available | Negative | 3208830 - 3212183 | 125072.0 |
| fecr family protein | PHEP_RS13485 | Not Available | Negative | 3212457 - 3213599 | 42077.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
