Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS13390 | Not Available | Negative | 3177562 - 3178374 | 29866.2 |
| putative toxin-antitoxin system toxin component, pin family | PHEP_RS13395 | Not Available | Negative | 3178700 - 3179188 | 18495.2 |
| hypothetical protein | PHEP_RS13400 | Not Available | Negative | 3179175 - 3179459 | 10949.2 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | PHEP_RS13405 | Not Available | Negative | 3179623 - 3181920 | 85286.0 |
| glycoside hydrolase family 97 protein | PHEP_RS13410 | Not Available | Negative | 3181969 - 3183858 | 69933.4 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS13415 | Not Available | Negative | 3183868 - 3185337 | 54683.5 |
| tonb-dependent receptor | PHEP_RS13420 | Not Available | Negative | 3185349 - 3188732 | 124807.0 |
| fecr family protein | PHEP_RS13425 | Not Available | Negative | 3188993 - 3190144 | 41992.0 |
| c-type cytochrome domain-containing protein | PHEP_RS13430 | Not Available | Negative | 3190233 - 3191639 | 51137.9 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS13435 | Not Available | Negative | 3191654 - 3192595 | 35809.8 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
