Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | PHEP_RS13340 | Not Available | Negative | 3159218 - 3160405 | 44768.3 |
| alpha-l-fucosidase | PHEP_RS13345 | Not Available | Negative | 3160428 - 3162311 | 70627.3 |
| alginate lyase family protein | PHEP_RS13350 | Not Available | Negative | 3162335 - 3163522 | 44594.9 |
| tim-barrel domain-containing protein | PHEP_RS13355 | Not Available | Negative | 3163531 - 3165678 | 80251.7 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | PHEP_RS13360 | Not Available | Negative | 3165693 - 3168299 | 96178.6 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | PHEP_RS13365 | Not Available | Negative | 3168301 - 3170778 | 91943.0 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | PHEP_RS13370 | Not Available | Negative | 3170775 - 3173237 | 93087.8 |
| arac family transcriptional regulator | PHEP_RS13375 | Not Available | Negative | 3173426 - 3174304 | 33594.6 |
| duf5009 domain-containing protein | PHEP_RS13380 | Not Available | Negative | 3174526 - 3175698 | 43496.8 |
| alpha-l-fucosidase | PHEP_RS13385 | Not Available | Negative | 3175708 - 3177498 | 67593.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
