Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj c-terminal domain-containing protein | PHEP_RS13245 | Not Available | Positive | 3133069 - 3133998 | 34696.6 |
| chaperone modulator cbpm | PHEP_RS13250 | Not Available | Positive | 3134005 - 3134295 | 11455.8 |
| m16 family metallopeptidase | PHEP_RS13255 | Not Available | Positive | 3134612 - 3136015 | 54225.4 |
| m16 family metallopeptidase | PHEP_RS13260 | Not Available | Positive | 3136020 - 3137306 | 48285.9 |
| duf47 domain-containing protein | PHEP_RS13265 | Not Available | Positive | 3137385 - 3138026 | 23927.7 |
| alkaline phosphatase phox | PHEP_RS13270 | Not Available | Positive | 3138125 - 3139606 | 53701.5 |
| cytochrome c peroxidase | PHEP_RS13275 | Not Available | Positive | 3139673 - 3141457 | 66325.5 |
| sulp family inorganic anion transporter | PHEP_RS13280 | Not Available | Positive | 3141492 - 3143006 | 54506.6 |
| hypothetical protein | PHEP_RS13285 | Not Available | Positive | 3143057 - 3143383 | 12123.4 |
| cusa/czca family heavy metal efflux rnd transporter | PHEP_RS13290 | Not Available | Positive | 3143483 - 3147859 | 160153.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
