Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS13195 | Not Available | Negative | 3117057 - 3117233 | 6355.65 |
| sigma-70 family rna polymerase sigma factor | PHEP_RS13200 | Not Available | Negative | 3117336 - 3118205 | 32794.7 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS13205 | Not Available | Negative | 3118473 - 3120059 | 60560.1 |
| tonb-dependent receptor | PHEP_RS13210 | Not Available | Negative | 3120071 - 3123283 | 118713.0 |
| fecr family protein | PHEP_RS21670 | Not Available | Negative | 3123436 - 3124521 | 40881.1 |
| rna polymerase sigma factor | PHEP_RS13220 | Not Available | Negative | 3124611 - 3125180 | 22029.8 |
| gfo/idh/moca family protein | PHEP_RS13225 | Not Available | Negative | 3125418 - 3126500 | 39699.3 |
| gfo/idh/moca family protein | PHEP_RS13230 | Not Available | Negative | 3126517 - 3127971 | 53578.5 |
| family 16 glycoside hydrolase | PHEP_RS13235 | Not Available | Negative | 3127998 - 3131420 | 123959.0 |
| gfo/idh/moca family oxidoreductase | PHEP_RS13240 | Not Available | Negative | 3131463 - 3132734 | 47403.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
