Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | PHEP_RS13145 | Not Available | Negative | 3110462 - 3111217 | 28419.3 |
| Trna-arg | Not Available | Not Available | Positive | 3111572 - 3111648 | Not Available |
| exonuclease domain-containing protein | PHEP_RS13155 | Not Available | Negative | 3111700 - 3113070 | 51314.1 |
| response regulator | PHEP_RS13160 | Not Available | Positive | 3113221 - 3113586 | 13491.8 |
| osmc family protein | PHEP_RS13165 | Not Available | Negative | 3113650 - 3114051 | 14868.0 |
| ferritin-like domain-containing protein | PHEP_RS13170 | Not Available | Positive | 3114211 - 3114666 | 17077.1 |
| ktsc domain-containing protein | PHEP_RS13175 | Not Available | Positive | 3114727 - 3114930 | 7855.58 |
| hypothetical protein | PHEP_RS13180 | Not Available | Negative | 3114938 - 3115504 | 19981.1 |
| hypothetical protein | PHEP_RS13185 | Not Available | Negative | 3115636 - 3115857 | 8318.02 |
| dna polymerase iv | PHEP_RS13190 | Not Available | Negative | 3115917 - 3116993 | 39557.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
