Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | PHEP_RS12995 | Not Available | Positive | 3064308 - 3065042 | 27424.9 |
| lmo0937 family membrane protein | PHEP_RS22090 | Not Available | Positive | 3065103 - 3065255 | 5357.03 |
| response regulator | PHEP_RS13000 | Not Available | Negative | 3065298 - 3065672 | 14357.3 |
| type 1 glutamine amidotransferase domain-containing protein | PHEP_RS13005 | Not Available | Positive | 3065882 - 3066445 | 20331.9 |
| dihydrofolate reductase family protein | PHEP_RS13010 | Not Available | Negative | 3066454 - 3067023 | 20940.1 |
| hsp20/alpha crystallin family protein | PHEP_RS21925 | Not Available | Negative | 3067450 - 3067587 | 5217.2 |
| stas/sec14 domain-containing protein | PHEP_RS13015 | Not Available | Positive | 3067654 - 3068022 | 13745.6 |
| ytxh domain-containing protein | PHEP_RS13020 | Not Available | Positive | 3068042 - 3068383 | 12601.1 |
| hypothetical protein | PHEP_RS13025 | Not Available | Negative | 3068551 - 3068838 | 10605.3 |
| hypothetical protein | PHEP_RS13030 | Not Available | Negative | 3068856 - 3069116 | 9600.73 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
