Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | PHEP_RS12950 | Not Available | Positive | 3059011 - 3059457 | 16732.0 |
| dna-formamidopyrimidine glycosylase family protein | PHEP_RS12955 | Not Available | Positive | 3059601 - 3060335 | 28555.1 |
| hypothetical protein | PHEP_RS12960 | Not Available | Negative | 3060347 - 3060604 | 9600.6 |
| duf6766 family protein | PHEP_RS12965 | Not Available | Positive | 3060902 - 3061573 | 25569.3 |
| srpbcc family protein | PHEP_RS12970 | Not Available | Negative | 3061661 - 3062164 | 19465.4 |
| arsr/smtb family transcription factor | PHEP_RS12975 | Not Available | Negative | 3062164 - 3062481 | 12501.3 |
| doxx family membrane protein | PHEP_RS12980 | Not Available | Negative | 3062507 - 3062887 | 14037.4 |
| cupin domain-containing protein | PHEP_RS12985 | Not Available | Positive | 3063102 - 3063401 | 11552.9 |
| ferritin-like domain-containing protein | PHEP_RS12990 | Not Available | Negative | 3063535 - 3063990 | 16787.8 |
| hypothetical protein | PHEP_RS22245 | Not Available | Negative | 3063997 - 3064155 | 6165.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
