Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar 3,4-ketoisomerase | PHEP_RS01255 | Not Available | Positive | 294802 - 295185 | 14773.5 |
| chrd domain-containing protein | PHEP_RS01260 | Not Available | Positive | 295332 - 295814 | 17286.3 |
| rna polymerase sigma factor | PHEP_RS01265 | Not Available | Positive | 295823 - 296431 | 23875.1 |
| fecr family protein | PHEP_RS01270 | Not Available | Positive | 296442 - 297437 | 37419.9 |
| tonb-dependent receptor | PHEP_RS01275 | Not Available | Positive | 297418 - 299976 | 97550.8 |
| duf4249 family protein | PHEP_RS01280 | Not Available | Positive | 299978 - 300814 | 31469.5 |
| hypothetical protein | PHEP_RS01285 | Not Available | Positive | 300864 - 302630 | 66338.1 |
| hypothetical protein | PHEP_RS01290 | Not Available | Positive | 302667 - 304457 | 67519.1 |
| branched-chain amino acid aminotransferase | PHEP_RS01295 | Not Available | Negative | 304507 - 305571 | 39000.5 |
| tryptophan 2,3-dioxygenase family protein | PHEP_RS01300 | Not Available | Negative | 305648 - 306616 | 37556.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
