Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | PHEP_RS12850 | Not Available | Negative | 3020771 - 3021766 | 36777.9 |
| gliding motility-associated c-terminal domain-containing protein | PHEP_RS12855 | Not Available | Negative | 3021781 - 3033162 | 390434.0 |
| hypothetical protein | PHEP_RS22240 | Not Available | Positive | 3033785 - 3033961 | 6766.21 |
| gntr family transcriptional regulator | PHEP_RS12860 | Not Available | Positive | 3034106 - 3034789 | 26042.5 |
| mbl fold metallo-hydrolase | PHEP_RS12865 | Not Available | Positive | 3034968 - 3035678 | 26223.0 |
| galactonate dehydratase | PHEP_RS12870 | Not Available | Positive | 3035687 - 3036853 | 43579.4 |
| mfs transporter | PHEP_RS12875 | Not Available | Positive | 3036875 - 3038137 | 46190.7 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS12880 | Not Available | Positive | 3038153 - 3038905 | 26436.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS12885 | Not Available | Positive | 3039185 - 3042271 | 113322.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS12890 | Not Available | Positive | 3042291 - 3044147 | 67850.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
