Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | PHEP_RS12495 | Not Available | Negative | 2925995 - 2926684 | 26021.7 |
| tlpa disulfide reductase family protein | PHEP_RS12500 | Not Available | Negative | 2926790 - 2927899 | 41161.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PHEP_RS12505 | Not Available | Negative | 2927908 - 2929371 | 54071.7 |
| hypothetical protein | PHEP_RS12510 | Not Available | Negative | 2929444 - 2929713 | 9710.52 |
| tonb-dependent receptor plug domain-containing protein | PHEP_RS12515 | Not Available | Negative | 2929814 - 2931676 | 69856.0 |
| duf6528 family protein | PHEP_RS21660 | Not Available | Negative | 2931869 - 2933599 | 61385.4 |
| endonuclease/exonuclease/phosphatase family protein | PHEP_RS12530 | Not Available | Negative | 2933654 - 2934505 | 30969.6 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS12535 | Not Available | Negative | 2934579 - 2936318 | 65438.8 |
| tonb-dependent receptor | PHEP_RS12540 | Not Available | Negative | 2936324 - 2939698 | 124241.0 |
| fecr family protein | PHEP_RS12545 | Not Available | Negative | 2940004 - 2941176 | 43160.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
