Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porp/sprf family type ix secretion system membrane protein | PHEP_RS01200 | Not Available | Negative | 279526 - 280554 | 37517.3 |
| pkd domain-containing protein | PHEP_RS01205 | Not Available | Negative | 280557 - 286340 | 203850.0 |
| chaperonin groel | PHEP_RS01210 | Not Available | Negative | 286652 - 288295 | 57826.7 |
| co-chaperone groes | PHEP_RS01215 | Not Available | Negative | 288339 - 288629 | 10142.1 |
| preprotein translocase subunit secg | PHEP_RS01220 | Not Available | Negative | 288841 - 289185 | 11570.4 |
| hypothetical protein | PHEP_RS01225 | Not Available | Negative | 289200 - 290306 | 42467.5 |
| lpte family protein | PHEP_RS01230 | Not Available | Negative | 290338 - 290841 | 18521.3 |
| sigma-54 interaction domain-containing protein | PHEP_RS01235 | Not Available | Negative | 290844 - 292079 | 46114.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | PHEP_RS01240 | Not Available | Negative | 292157 - 293614 | 54776.2 |
| hypothetical protein | PHEP_RS01250 | Not Available | Positive | 293811 - 294818 | 39395.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
