Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | PHEP_RS12350 | Not Available | Negative | 2890910 - 2891968 | 39756.5 |
| pas domain-containing sensor histidine kinase | PHEP_RS12355 | Not Available | Negative | 2891965 - 2893149 | 45063.1 |
| hypothetical protein | PHEP_RS12360 | Not Available | Positive | 2893312 - 2895093 | 66578.0 |
| sco family protein | PHEP_RS12365 | Not Available | Negative | 2895105 - 2895746 | 24372.6 |
| hypothetical protein | PHEP_RS12370 | Not Available | Negative | 2895746 - 2896180 | 16090.7 |
| sialidase family protein | PHEP_RS12375 | Not Available | Negative | 2896193 - 2897485 | 46319.0 |
| tonb-dependent receptor domain-containing protein | PHEP_RS12380 | Not Available | Negative | 2897495 - 2899807 | 84878.2 |
| hypothetical protein | PHEP_RS22235 | Not Available | Negative | 2900014 - 2900385 | 14095.4 |
| alpha/beta hydrolase | PHEP_RS12390 | Not Available | Negative | 2900440 - 2901225 | 29588.4 |
| acyl-coa thioesterase | PHEP_RS12395 | Not Available | Negative | 2901449 - 2901838 | 14553.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
