Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | PHEP_RS12305 | Not Available | Positive | 2880692 - 2883091 | 88953.6 |
| cbb3-type cytochrome oxidase assembly protein ccos | PHEP_RS12310 | Not Available | Positive | 2883088 - 2883273 | 7009.43 |
| cytochrome-c oxidase, cbb3-type subunit i | PHEP_RS12315 | Not Available | Positive | 2883346 - 2885457 | 79996.5 |
| hypothetical protein | PHEP_RS22230 | Not Available | Positive | 2885478 - 2885645 | 6258.85 |
| cbb3-type cytochrome c oxidase n-terminal domain-containing protein | PHEP_RS12320 | Not Available | Positive | 2885642 - 2886442 | 29566.6 |
| cytochrome c oxidase accessory protein ccog | PHEP_RS12325 | Not Available | Positive | 2886408 - 2887844 | 55032.1 |
| fixh family protein | PHEP_RS12330 | Not Available | Positive | 2887849 - 2888274 | 16122.6 |
| sulfite exporter taue/safe family protein | PHEP_RS12335 | Not Available | Positive | 2888271 - 2888957 | 24660.2 |
| oxygen-independent coproporphyrinogen iii oxidase | PHEP_RS12340 | Not Available | Negative | 2888995 - 2890359 | 52161.2 |
| lactate dehydrogenase | PHEP_RS12345 | Not Available | Negative | 2890349 - 2890825 | 17142.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
