Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | PHEP_RS12255 | Not Available | Positive | 2866336 - 2867394 | 38599.7 |
| s1 rna-binding domain-containing protein | PHEP_RS12260 | Not Available | Positive | 2867410 - 2868258 | 31844.2 |
| gmc oxidoreductase | PHEP_RS12265 | Not Available | Negative | 2868476 - 2870176 | 64241.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | PHEP_RS12270 | Not Available | Negative | 2870203 - 2870787 | 21457.9 |
| acyl-coa thioesterase | PHEP_RS12275 | Not Available | Positive | 2870951 - 2871376 | 16602.2 |
| bama/tama family outer membrane protein | PHEP_RS12280 | Not Available | Negative | 2871383 - 2873995 | 98949.3 |
| gaf domain-containing protein | PHEP_RS12285 | Not Available | Negative | 2874009 - 2876363 | 90709.6 |
| sdia-regulated domain-containing protein | PHEP_RS12290 | Not Available | Negative | 2876446 - 2877327 | 33363.8 |
| polyphosphate kinase 1 | PHEP_RS12295 | Not Available | Negative | 2877324 - 2879303 | 75302.3 |
| pycsar system effector family protein | PHEP_RS12300 | Not Available | Negative | 2879311 - 2880549 | 47248.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
