Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6266 family protein | PHEP_RS12200 | Not Available | Negative | 2857353 - 2857982 | 23161.7 |
| ytxh domain-containing protein | PHEP_RS12205 | Not Available | Positive | 2858290 - 2858694 | 14534.2 |
| mfs transporter | PHEP_RS12210 | Not Available | Negative | 2858757 - 2859920 | 42644.4 |
| sulfur carrier protein this | PHEP_RS12220 | Not Available | Positive | 2860222 - 2860422 | 7222.83 |
| phosphomethylpyrimidine synthase thic | PHEP_RS12225 | Not Available | Positive | 2860505 - 2862388 | 69935.5 |
| thiamine phosphate synthase | PHEP_RS12230 | Not Available | Positive | 2862412 - 2863023 | 22582.2 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | PHEP_RS12235 | Not Available | Positive | 2863016 - 2863822 | 29611.9 |
| thiamine phosphate synthase | PHEP_RS12240 | Not Available | Positive | 2863812 - 2864435 | 21797.7 |
| thiazole synthase | PHEP_RS12245 | Not Available | Positive | 2864429 - 2865196 | 26804.9 |
| 2-iminoacetate synthase thih | PHEP_RS12250 | Not Available | Positive | 2865213 - 2866331 | 42502.7 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
