Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS12150 | Not Available | Negative | 2848086 - 2848691 | 24043.0 |
| hypothetical protein | PHEP_RS12155 | Not Available | Positive | 2848931 - 2849191 | 10060.0 |
| response regulator transcription factor | PHEP_RS12160 | Not Available | Positive | 2849201 - 2849875 | 25803.2 |
| sensor histidine kinase | PHEP_RS12165 | Not Available | Positive | 2849876 - 2851192 | 50192.5 |
| peroxiredoxin family protein | PHEP_RS12170 | Not Available | Positive | 2851266 - 2851748 | 18540.6 |
| nuclear transport factor 2 family protein | PHEP_RS12175 | Not Available | Negative | 2851752 - 2852183 | 15677.0 |
| prolyl oligopeptidase family serine peptidase | PHEP_RS12180 | Not Available | Negative | 2852224 - 2854269 | 75734.4 |
| universal stress protein | PHEP_RS12185 | Not Available | Negative | 2854383 - 2855201 | 29947.5 |
| duf3050 domain-containing protein | PHEP_RS12190 | Not Available | Negative | 2855228 - 2856004 | 29161.7 |
| mfs transporter | PHEP_RS12195 | Not Available | Negative | 2856090 - 2857250 | 40705.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
