Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | PHEP_RS12100 | Not Available | Negative | 2836259 - 2837260 | 36892.8 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS12105 | Not Available | Negative | 2837257 - 2838045 | 28423.6 |
| duf6904 family protein | PHEP_RS12110 | Not Available | Negative | 2838042 - 2838611 | 21645.2 |
| eama family transporter | PHEP_RS12115 | Not Available | Positive | 2838965 - 2839813 | 29516.7 |
| m1 family metallopeptidase | PHEP_RS12120 | Not Available | Negative | 2839852 - 2841705 | 69380.3 |
| hypothetical protein | PHEP_RS12125 | Not Available | Negative | 2841709 - 2842320 | 21679.9 |
| phoh family protein | PHEP_RS12130 | Not Available | Negative | 2842377 - 2843705 | 49809.9 |
| c-type cytochrome | PHEP_RS12135 | Not Available | Negative | 2844424 - 2846712 | 84785.6 |
| ribose 5-phosphate isomerase b | PHEP_RS12140 | Not Available | Negative | 2846719 - 2847168 | 16105.3 |
| duf4397 domain-containing protein | PHEP_RS12145 | Not Available | Positive | 2847284 - 2848000 | 25122.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
