Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PHEP_RS12050 | Not Available | Positive | 2826793 - 2827677 | 33805.8 |
| gnat family n-acetyltransferase | PHEP_RS12055 | Not Available | Negative | 2827674 - 2828234 | 20326.4 |
| duf2784 domain-containing protein | PHEP_RS12060 | Not Available | Negative | 2828242 - 2828616 | 14274.4 |
| dipeptidase | PHEP_RS12065 | Not Available | Positive | 2828668 - 2829813 | 42571.2 |
| dabb family protein | PHEP_RS12070 | Not Available | Negative | 2829854 - 2830150 | 11395.6 |
| virulence factor family protein | PHEP_RS21655 | Not Available | Positive | 2830271 - 2831008 | 27946.6 |
| virulence factor family protein | PHEP_RS12080 | Not Available | Positive | 2831005 - 2831682 | 25504.7 |
| phosphatidylglycerol lysyltransferase domain-containing protein | PHEP_RS12085 | Not Available | Negative | 2831679 - 2834267 | 97601.1 |
| lytr/algr family response regulator transcription factor | PHEP_RS12090 | Not Available | Negative | 2834373 - 2835140 | 30018.6 |
| sensor histidine kinase | PHEP_RS12095 | Not Available | Negative | 2835121 - 2836212 | 42449.3 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
