Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylpyruvate isomerase n-terminal domain-containing protein | PHEP_RS11950 | Not Available | Negative | 2806147 - 2806983 | 31539.8 |
| class i sam-dependent methyltransferase | PHEP_RS11955 | Not Available | Negative | 2807036 - 2807776 | 27758.1 |
| dinb family protein | PHEP_RS11960 | Not Available | Negative | 2807798 - 2808274 | 18419.4 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | PHEP_RS11965 | Not Available | Positive | 2808410 - 2808790 | 14370.5 |
| serine hydrolase domain-containing protein | PHEP_RS11970 | Not Available | Negative | 2808798 - 2810126 | 47843.8 |
| energy transducer tonb | PHEP_RS21645 | Not Available | Negative | 2810187 - 2810855 | 25311.7 |
| fad-binding and (fe-s)-binding domain-containing protein | PHEP_RS11980 | Not Available | Negative | 2810872 - 2813805 | 108912.0 |
| aldehyde dehydrogenase family protein | PHEP_RS11985 | Not Available | Negative | 2813836 - 2815365 | 54430.1 |
| duf1338 domain-containing protein | PHEP_RS11990 | Not Available | Negative | 2815381 - 2816286 | 34898.7 |
| saccharopine dehydrogenase c-terminal domain-containing protein | PHEP_RS11995 | Not Available | Negative | 2816290 - 2817354 | 39176.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
