Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2752 domain-containing protein | PHEP_RS01150 | Not Available | Positive | 270039 - 270383 | 12796.2 |
| rdd family protein | PHEP_RS01155 | Not Available | Negative | 270414 - 271157 | 27579.7 |
| stage ii sporulation protein m | PHEP_RS01160 | Not Available | Positive | 271249 - 272205 | 36172.4 |
| glycerophosphoryl diester phosphodiesterase membrane domain-containing protein | PHEP_RS01165 | Not Available | Positive | 272202 - 273086 | 33405.4 |
| duf4129 domain-containing protein | PHEP_RS01170 | Not Available | Positive | 273089 - 273814 | 28088.0 |
| duf4350 domain-containing protein | PHEP_RS01175 | Not Available | Positive | 273811 - 274992 | 45352.2 |
| aaa family atpase | PHEP_RS01180 | Not Available | Positive | 274996 - 275973 | 36093.8 |
| duf58 domain-containing protein | PHEP_RS01185 | Not Available | Positive | 275986 - 277332 | 52055.2 |
| l-serine ammonia-lyase | PHEP_RS01190 | Not Available | Negative | 277329 - 278756 | 51037.3 |
| mgtc/sapb family protein | PHEP_RS01195 | Not Available | Negative | 278814 - 279470 | 24199.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
