Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | PHEP_RS11800 | Not Available | Negative | 2778967 - 2780283 | 48458.3 |
| transketolase | PHEP_RS11805 | Not Available | Negative | 2780402 - 2782267 | 68099.6 |
| duf2809 domain-containing protein | PHEP_RS11810 | Not Available | Negative | 2782449 - 2782847 | 15258.6 |
| voc family protein | PHEP_RS11815 | Not Available | Positive | 2783133 - 2783585 | 16638.2 |
| hypothetical protein | PHEP_RS11820 | Not Available | Negative | 2783645 - 2783878 | 8893.87 |
| hypothetical protein | PHEP_RS11825 | Not Available | Positive | 2784150 - 2784545 | 15806.5 |
| dihydrofolate reductase family protein | PHEP_RS11830 | Not Available | Negative | 2784624 - 2785202 | 21591.2 |
| srpbcc domain-containing protein | PHEP_RS11835 | Not Available | Negative | 2785199 - 2785687 | 19072.7 |
| arsr/smtb family transcription factor | PHEP_RS11840 | Not Available | Negative | 2785698 - 2786018 | 12458.0 |
| hypothetical protein | PHEP_RS11845 | Not Available | Negative | 2786295 - 2786648 | 13661.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
